Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 RPL18AP2-201ENST00000450007 482 ntBASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 HTR4-210ENST00000521735 1242 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIMBP3Q9UFD9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RIMBP3Q9UFD9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RIMBP3Q9UFD9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 TBC1D3P3-201ENST00000342824 1080 ntBASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 MIOXP1-201ENST00000521205 835 ntBASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 APOC1P1-202ENST00000571466 253 ntBASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 AC021683.4-201ENST00000623348 1099 ntBASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC21.01■□□□□ 0.95
RIMBP3Q9UFD9 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 FAM45BP-201ENST00000408950 1074 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AQP7P1-201ENST00000412626 1045 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC008870.3-201ENST00000566143 641 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 RPSAP67-201ENST00000584105 862 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 RPL19P20-201ENST00000415648 591 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC074085.2-201ENST00000416734 428 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 ZEB2P1-201ENST00000515048 1141 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 SLC25A51P3-201ENST00000521814 889 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 MIR4294-201ENST00000584548 76 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 AC092723.2-201ENST00000624955 793 ntBASIC21■□□□□ 0.95
RIMBP3Q9UFD9 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RIMBP3Q9UFD9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 BX005132.1-201ENST00000641403 1580 ntBASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AC104640.1-201ENST00000562617 2109 ntBASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIMBP3Q9UFD9 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms