Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 AGGF1P10-201ENST00000635005 2191 ntBASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AMBRA1Q9C0C7 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 KRT18P15-201ENST00000458108 1291 ntBASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AC023310.1-201ENST00000554836 735 ntBASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 DUX4L45-201ENST00000566406 1057 ntBASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AC132192.2-201ENST00000596206 1147 ntBASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AMBRA1Q9C0C7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 E2F3P2-201ENST00000447755 1422 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 CCT8L1P-201ENST00000465400 1674 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AHCYP2-201ENST00000430630 1300 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 LINC01165-201ENST00000445190 1623 ntBASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AMBRA1Q9C0C7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms