Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 RPSAP15-201ENST00000448168 861 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 RN7SL530P-201ENST00000485097 298 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 DNM1P30-201ENST00000563586 452 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 AC242376.2-201ENST00000619355 883 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 FAM90A12P-201ENST00000519497 2375 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 FAM90A24P-201ENST00000520792 2369 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 RNA5SP359-201ENST00000364838 113 ntBASIC13.37□□□□□ -0.27
TM9SF4Q92544 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 AC087045.2-201ENST00000606279 1003 ntBASIC13.37□□□□□ -0.27
TM9SF4Q92544 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 LINC01165-201ENST00000445190 1623 ntBASIC13.37□□□□□ -0.27
TM9SF4Q92544 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 TCAM1P-207ENST00000485295 1537 ntBASIC13.37□□□□□ -0.27
TM9SF4Q92544 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TM9SF4Q92544 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TM9SF4Q92544 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.36□□□□□ -0.27
TM9SF4Q92544 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TM9SF4Q92544 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms