Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 KRT8P21-201ENST00000430398 1491 ntBASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.77□□□□□ -0.52
SSMEM1Q8WWF3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AL645933.1-201ENST00000440087 609 ntBASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC234782.1-201ENST00000451950 919 ntBASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC006122.1-201ENST00000493323 440 ntBASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC079336.7-201ENST00000623428 1078 ntBASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSMEM1Q8WWF3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC020910.6-201ENST00000623084 1459 ntBASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 RTN3P1-201ENST00000536295 711 ntBASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC11.76□□□□□ -0.53
SSMEM1Q8WWF3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms