Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 FP325317.1-201ENST00000539936 1042 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC063924.1-201ENST00000546680 673 ntBASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
ALMS1Q8TCU4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AL513497.1-201ENST00000624273 2083 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 MYL6-210ENST00000548400 573 ntTSL 3 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC245884.8-201ENST00000599382 880 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC010601.2-201ENST00000623060 774 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 MRPS16P3-201ENST00000415961 374 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 HNRNPA1P30-202ENST00000440699 997 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC114781.1-201ENST00000450559 1028 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 Z97653.2-201ENST00000623057 1418 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC068418.2-201ENST00000577309 3703 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 SERF2-205ENST00000403425 690 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AC067942.2-201ENST00000506227 1268 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 HNRNPA1P4-201ENST00000509706 756 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 AL031058.1-201ENST00000561592 888 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 FRG2EP-201ENST00000634243 835 ntBASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
ALMS1Q8TCU4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 MBL3P-201ENST00000402234 644 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms