Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 RN7SL440P-201ENST00000577855 343 ntBASIC13.77□□□□□ -0.21
RNF217Q8TC41 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RNF217Q8TC41 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RNF217Q8TC41 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 FAM90A12P-201ENST00000519497 2375 ntBASIC13.76□□□□□ -0.21
RNF217Q8TC41 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 KRT8P22-201ENST00000562317 1415 ntBASIC13.76□□□□□ -0.21
RNF217Q8TC41 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AL442647.2-201ENST00000429864 857 ntBASIC13.76□□□□□ -0.21
RNF217Q8TC41 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.76□□□□□ -0.21
RNF217Q8TC41 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 LINC00567-201ENST00000569854 3409 ntBASIC13.76□□□□□ -0.21
RNF217Q8TC41 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RNF217Q8TC41 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.76□□□□□ -0.21
RNF217Q8TC41 NT5C3AP1-202ENST00000441170 1663 ntBASIC13.75□□□□□ -0.21
RNF217Q8TC41 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF217Q8TC41 FAM90A24P-201ENST00000520792 2369 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms