Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CFAP61Q8NHU2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC079178.1-201ENST00000420915 656 ntBASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 RPS2P32-201ENST00000439199 892 ntBASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 RNA5SP412-201ENST00000516234 123 ntBASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CFAP61Q8NHU2 AC215219.1-201ENST00000400706 1817 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 MTX1P1-201ENST00000440904 838 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 Z93015.1-201ENST00000451718 390 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AL583810.1-201ENST00000553344 1045 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 AC135782.3-201ENST00000562782 2105 ntBASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CFAP61Q8NHU2 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP61Q8NHU2 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms