Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 MESTP3-201ENST00000503460 968 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 FTLP10-202ENST00000505798 471 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 AP001002.3-201ENST00000623482 206 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 AL033527.4-201ENST00000641026 673 ntBASIC12.62□□□□□ -0.39
LRRC28Q86X40 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.62□□□□□ -0.39
LRRC28Q86X40 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRRC28Q86X40 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 AC138466.3-201ENST00000619983 221 ntBASIC12.61□□□□□ -0.39
LRRC28Q86X40 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 LINC00567-201ENST00000569854 3409 ntBASIC12.61□□□□□ -0.39
LRRC28Q86X40 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.61□□□□□ -0.39
LRRC28Q86X40 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LRRC28Q86X40 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LRRC28Q86X40 GHET1-201ENST00000627071 1906 ntBASIC12.6□□□□□ -0.39
LRRC28Q86X40 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.6□□□□□ -0.39
LRRC28Q86X40 AGGF1P10-201ENST00000635005 2191 ntBASIC12.6□□□□□ -0.39
LRRC28Q86X40 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms