Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ALG1L8P-201ENST00000533887 760 ntBASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 AC022145.2-201ENST00000598203 171 ntBASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 MIR6080-201ENST00000617359 66 ntBASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 CR392039.2-201ENST00000623182 509 ntBASIC10.96□□□□□ -0.65
KCNIP4Q6PIL6 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
KCNIP4Q6PIL6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AC010536.1-201ENST00000538868 2611 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 KRT18P13-201ENST00000400056 1290 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ADH5P3-201ENST00000433842 1137 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 KRT18P64-201ENST00000434946 1219 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 MTND6P24-201ENST00000440466 518 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AC023141.5-201ENST00000458585 616 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 SERBP1P3-201ENST00000459980 809 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AC069335.1-201ENST00000489972 472 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 LINC01225-203ENST00000563550 1244 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 AC108024.1-201ENST00000626286 1721 ntBASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KCNIP4Q6PIL6 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms