Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LPCAT4Q643R3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AC069262.1-201ENST00000539058 672 ntBASIC13.28□□□□□ -0.28
LPCAT4Q643R3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AL844908.2-201ENST00000609461 460 ntBASIC13.28□□□□□ -0.28
LPCAT4Q643R3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 REXO1L1P-201ENST00000379010 6598 ntBASIC13.28□□□□□ -0.28
LPCAT4Q643R3 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.28□□□□□ -0.28
LPCAT4Q643R3 MARK2P16-201ENST00000605714 1723 ntBASIC13.27□□□□□ -0.28
LPCAT4Q643R3 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 DBIL5P-203ENST00000536214 2677 ntBASIC13.27□□□□□ -0.28
LPCAT4Q643R3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 TNKS-213ENST00000522110 2900 ntBASIC13.27□□□□□ -0.28
LPCAT4Q643R3 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LPCAT4Q643R3 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LPCAT4Q643R3 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms