Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ECM1P1-201ENST00000604092 1279 ntBASIC15.6■□□□□ 0.09
TSR1Q2NL82 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TSR1Q2NL82 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TSR1Q2NL82 AGAP12P-201ENST00000585227 2359 ntBASIC15.6■□□□□ 0.09
TSR1Q2NL82 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 DGCR5-201ENST00000399539 862 ntBASIC15.59■□□□□ 0.09
TSR1Q2NL82 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 INE1-201ENST00000456273 945 ntBASIC15.59■□□□□ 0.09
TSR1Q2NL82 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 MIR4683-201ENST00000579659 81 ntBASIC15.59■□□□□ 0.09
TSR1Q2NL82 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TSR1Q2NL82 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TSR1Q2NL82 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms