Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.31□□□□□ -0.28
RAE1P78406 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.31□□□□□ -0.28
RAE1P78406 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 AL157791.1-201ENST00000553667 1699 ntBASIC13.31□□□□□ -0.28
RAE1P78406 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
RAE1P78406 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.31□□□□□ -0.28
RAE1P78406 AC004554.1-201ENST00000422830 1468 ntBASIC13.31□□□□□ -0.28
RAE1P78406 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RAE1P78406 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.31□□□□□ -0.28
RAE1P78406 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.31□□□□□ -0.28
RAE1P78406 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 CYP46A4P-201ENST00000414953 267 ntBASIC13.31□□□□□ -0.28
RAE1P78406 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
RAE1P78406 AL596276.2-201ENST00000447525 331 ntBASIC13.31□□□□□ -0.28
RAE1P78406 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.31□□□□□ -0.28
RAE1P78406 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.31□□□□□ -0.28
RAE1P78406 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
RAE1P78406 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAE1P78406 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.31□□□□□ -0.28
RAE1P78406 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 AL445209.1-201ENST00000607269 3491 ntBASIC13.3□□□□□ -0.28
RAE1P78406 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RAE1P78406 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.3□□□□□ -0.28
RAE1P78406 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 AC091804.1-201ENST00000486888 567 ntBASIC13.3□□□□□ -0.28
RAE1P78406 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.3□□□□□ -0.28
RAE1P78406 RN7SL219P-201ENST00000582872 296 ntBASIC13.3□□□□□ -0.28
RAE1P78406 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 AC020763.3-201ENST00000625095 2904 ntBASIC13.3□□□□□ -0.28
RAE1P78406 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.3□□□□□ -0.28
RAE1P78406 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 CICP20-201ENST00000443330 2801 ntBASIC13.3□□□□□ -0.28
RAE1P78406 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.3□□□□□ -0.28
RAE1P78406 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAE1P78406 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAE1P78406 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.29□□□□□ -0.28
RAE1P78406 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.29□□□□□ -0.28
RAE1P78406 AP002761.4-201ENST00000565433 3361 ntBASIC13.29□□□□□ -0.28
RAE1P78406 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAE1P78406 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAE1P78406 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms