Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 AC020658.7-201ENST00000624274 2442 ntBASIC12.31□□□□□ -0.44
HIST1H3AP68431 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H3AP68431 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H3AP68431 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 MEG3_2.1-201ENST00000611456 105 ntBASIC12.3□□□□□ -0.44
HIST1H3AP68431 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 CICP17-201ENST00000418553 2377 ntBASIC12.3□□□□□ -0.44
HIST1H3AP68431 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HIST1H3AP68431 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HIST1H3AP68431 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 AL356585.2-201ENST00000625078 2396 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 AL157791.1-201ENST00000553667 1699 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 AC108024.1-201ENST00000626286 1721 ntBASIC12.29□□□□□ -0.44
HIST1H3AP68431 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HIST1H3AP68431 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.29□□□□□ -0.44
HIST1H3AP68431 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms