Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.87□□□□□ -0.03
USP46P62068 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.87□□□□□ -0.03
USP46P62068 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 KLF17P1-201ENST00000547105 1126 ntBASIC14.87□□□□□ -0.03
USP46P62068 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.87□□□□□ -0.03
USP46P62068 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.87□□□□□ -0.03
USP46P62068 RN7SL665P-201ENST00000578793 300 ntBASIC14.87□□□□□ -0.03
USP46P62068 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 U62317.3-201ENST00000608319 855 ntBASIC14.87□□□□□ -0.03
USP46P62068 AC011491.1-203ENST00000637688 543 ntBASIC14.87□□□□□ -0.03
USP46P62068 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
USP46P62068 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 SHMT1P1-201ENST00000419974 1312 ntBASIC14.87□□□□□ -0.03
USP46P62068 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
USP46P62068 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.87□□□□□ -0.03
USP46P62068 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP46P62068 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 HLA-DMA-203ENST00000395305 777 ntBASIC14.86□□□□□ -0.03
USP46P62068 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.86□□□□□ -0.03
USP46P62068 BX679664.3-201ENST00000414070 555 ntBASIC14.86□□□□□ -0.03
USP46P62068 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 AL512306.1-201ENST00000432698 848 ntBASIC14.86□□□□□ -0.03
USP46P62068 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.86□□□□□ -0.03
USP46P62068 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.86□□□□□ -0.03
USP46P62068 KRT18P15-201ENST00000458108 1291 ntBASIC14.86□□□□□ -0.03
USP46P62068 AC113935.1-201ENST00000471722 555 ntBASIC14.86□□□□□ -0.03
USP46P62068 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.86□□□□□ -0.03
USP46P62068 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.86□□□□□ -0.03
USP46P62068 AL031713.1-201ENST00000564813 661 ntBASIC14.86□□□□□ -0.03
USP46P62068 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
USP46P62068 AC005618.3-201ENST00000624928 458 ntBASIC14.86□□□□□ -0.03
USP46P62068 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 RPL13AP3-202ENST00000494676 1473 ntBASIC14.86□□□□□ -0.03
USP46P62068 AC073869.1-201ENST00000415574 2762 ntBASIC14.86□□□□□ -0.03
USP46P62068 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
USP46P62068 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 AC126335.2-201ENST00000623362 4637 ntBASIC14.86□□□□□ -0.03
USP46P62068 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.86□□□□□ -0.03
USP46P62068 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP46P62068 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.85□□□□□ -0.03
USP46P62068 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP46P62068 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.85□□□□□ -0.03
USP46P62068 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
USP46P62068 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP46P62068 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.85□□□□□ -0.03
USP46P62068 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
USP46P62068 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP46P62068 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
USP46P62068 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms