Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.11■□□□□ 0.01
SSR1P43307 AC079178.1-201ENST00000420915 656 ntBASIC15.11■□□□□ 0.01
SSR1P43307 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.11■□□□□ 0.01
SSR1P43307 KLF2P1-201ENST00000447438 1042 ntBASIC15.11■□□□□ 0.01
SSR1P43307 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.11■□□□□ 0.01
SSR1P43307 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.11■□□□□ 0.01
SSR1P43307 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.11■□□□□ 0.01
SSR1P43307 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.11■□□□□ 0.01
SSR1P43307 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.11■□□□□ 0.01
SSR1P43307 SNX29P1-201ENST00000548357 1007 ntBASIC15.11■□□□□ 0.01
SSR1P43307 AC244157.2-201ENST00000616239 1006 ntBASIC15.11■□□□□ 0.01
SSR1P43307 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SSR1P43307 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC15.11■□□□□ 0.01
SSR1P43307 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSR1P43307 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSR1P43307 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SSR1P43307 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SSR1P43307 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC15.1■□□□□ 0.01
SSR1P43307 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 LAP3P2-201ENST00000454686 1454 ntBASIC15.1■□□□□ 0.01
SSR1P43307 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SSR1P43307 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 ANKRD19P-201ENST00000338192 862 ntBASIC15.1■□□□□ 0.01
SSR1P43307 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 MIR1909-201ENST00000411312 80 ntBASIC15.1■□□□□ 0.01
SSR1P43307 HLA-V-201ENST00000429037 534 ntBASIC15.1■□□□□ 0.01
SSR1P43307 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.1■□□□□ 0.01
SSR1P43307 AC106886.1-201ENST00000568660 600 ntBASIC15.1■□□□□ 0.01
SSR1P43307 AC009955.4-201ENST00000597192 544 ntBASIC15.1■□□□□ 0.01
SSR1P43307 MIR6775-201ENST00000617557 69 ntBASIC15.1■□□□□ 0.01
SSR1P43307 AL035252.4-201ENST00000624174 288 ntBASIC15.1■□□□□ 0.01
SSR1P43307 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
SSR1P43307 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC15.1■□□□□ 0.01
SSR1P43307 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SSR1P43307 AC105206.1-202ENST00000314927 2368 ntBASIC15.1■□□□□ 0.01
SSR1P43307 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSR1P43307 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
SSR1P43307 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.09■□□□□ 0.01
SSR1P43307 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.09■□□□□ 0.01
SSR1P43307 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms