Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.11■□□□□ 0.01
HTTP42858 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 AC007279.1-201ENST00000448547 837 ntBASIC15.11■□□□□ 0.01
HTTP42858 CAP2-207ENST00000493172 861 ntTSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 EEF1GP2-201ENST00000509352 1243 ntBASIC15.11■□□□□ 0.01
HTTP42858 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC15.11■□□□□ 0.01
HTTP42858 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC15.11■□□□□ 0.01
HTTP42858 AC099795.2-201ENST00000639582 440 ntBASIC15.11■□□□□ 0.01
HTTP42858 AC007686.3-201ENST00000619017 3487 ntBASIC15.11■□□□□ 0.01
HTTP42858 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HTTP42858 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HTTP42858 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HTTP42858 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC15.11■□□□□ 0.01
HTTP42858 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 IGHV3OR16-11-201ENST00000565524 349 ntBASIC15.11■□□□□ 0.01
HTTP42858 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC15.11■□□□□ 0.01
HTTP42858 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HTTP42858 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTTP42858 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC15.1■□□□□ 0.01
HTTP42858 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 AL355075.5-201ENST00000553568 890 ntBASIC15.1■□□□□ 0.01
HTTP42858 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
HTTP42858 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC15.1■□□□□ 0.01
HTTP42858 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HTTP42858 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 USP17L6P-201ENST00000382470 1197 ntBASIC15.1■□□□□ 0.01
HTTP42858 AL391822.1-201ENST00000452580 562 ntBASIC15.1■□□□□ 0.01
HTTP42858 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC15.1■□□□□ 0.01
HTTP42858 AC010442.2-201ENST00000509301 407 ntBASIC15.1■□□□□ 0.01
HTTP42858 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC15.1■□□□□ 0.01
HTTP42858 AC005336.1-201ENST00000585431 1243 ntBASIC15.1■□□□□ 0.01
HTTP42858 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HTTP42858 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTTP42858 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HTTP42858 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.09■□□□□ 0.01
HTTP42858 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HTTP42858 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC15.09■□□□□ 0.01
HTTP42858 AC096713.1-201ENST00000514650 978 ntBASIC15.09■□□□□ 0.01
HTTP42858 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC15.09■□□□□ 0.01
HTTP42858 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms