Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 AC006987.1-201ENST00000413610 527 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.57□□□□□ -0.56
CEACAM3P40198 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.57□□□□□ -0.56
CEACAM3P40198 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.57□□□□□ -0.56
CEACAM3P40198 AL353637.1-201ENST00000451571 732 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 DUX4L50-201ENST00000455245 715 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.57□□□□□ -0.56
CEACAM3P40198 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
CEACAM3P40198 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.57□□□□□ -0.56
CEACAM3P40198 KRT8P1-201ENST00000557533 1207 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.57□□□□□ -0.56
CEACAM3P40198 KRT18P8-201ENST00000581937 1246 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.57□□□□□ -0.56
CEACAM3P40198 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 MIR6787-201ENST00000616675 61 ntBASIC11.57□□□□□ -0.56
CEACAM3P40198 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CEACAM3P40198 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.56□□□□□ -0.56
CEACAM3P40198 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.56□□□□□ -0.56
CEACAM3P40198 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.56□□□□□ -0.56
CEACAM3P40198 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CEACAM3P40198 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.56□□□□□ -0.56
CEACAM3P40198 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.56□□□□□ -0.56
CEACAM3P40198 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.56□□□□□ -0.56
CEACAM3P40198 AL133466.1-201ENST00000447582 150 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 CHCHD2P2-201ENST00000503744 321 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.56□□□□□ -0.56
CEACAM3P40198 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.56□□□□□ -0.56
CEACAM3P40198 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
CEACAM3P40198 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.56□□□□□ -0.56
CEACAM3P40198 AL161670.2-201ENST00000557650 1227 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CEACAM3P40198 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CEACAM3P40198 LINC01783-202ENST00000614408 828 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CEACAM3P40198 BX284668.2-205ENST00000619677 828 ntBASIC11.56□□□□□ -0.56
CEACAM3P40198 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC11.56□□□□□ -0.56
CEACAM3P40198 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms