Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CCL1P22362 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CCL1P22362 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 SERPINA13P-202ENST00000478994 924 ntBASIC12.09□□□□□ -0.47
CCL1P22362 RCC2P8-201ENST00000502779 1035 ntBASIC12.09□□□□□ -0.47
CCL1P22362 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 KRT8P1-201ENST00000557533 1207 ntBASIC12.09□□□□□ -0.47
CCL1P22362 AC104758.3-203ENST00000562938 2123 ntBASIC12.09□□□□□ -0.47
CCL1P22362 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 AC104982.3-201ENST00000581995 514 ntBASIC12.09□□□□□ -0.47
CCL1P22362 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 MIR6805-201ENST00000615055 62 ntBASIC12.09□□□□□ -0.47
CCL1P22362 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.09□□□□□ -0.47
CCL1P22362 AC018735.1-201ENST00000437208 1502 ntBASIC12.09□□□□□ -0.47
CCL1P22362 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 AC067931.2-201ENST00000623655 2003 ntBASIC12.09□□□□□ -0.47
CCL1P22362 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 GHET1-201ENST00000627071 1906 ntBASIC12.09□□□□□ -0.47
CCL1P22362 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.09□□□□□ -0.47
CCL1P22362 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
CCL1P22362 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCL1P22362 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CCL1P22362 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CCL1P22362 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 PTENP1-202ENST00000532280 3996 ntBASIC12.08□□□□□ -0.48
CCL1P22362 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 AC008040.5-201ENST00000599781 1781 ntBASIC12.08□□□□□ -0.48
CCL1P22362 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 AC245140.2-201ENST00000624054 1939 ntBASIC12.08□□□□□ -0.48
CCL1P22362 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.08□□□□□ -0.48
CCL1P22362 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 SLC25A15P3-201ENST00000505530 290 ntBASIC12.08□□□□□ -0.48
CCL1P22362 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 FAM8A2P-201ENST00000528813 1142 ntBASIC12.08□□□□□ -0.48
CCL1P22362 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.08□□□□□ -0.48
CCL1P22362 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.08□□□□□ -0.48
CCL1P22362 AC017083.2-201ENST00000608069 979 ntBASIC12.08□□□□□ -0.48
CCL1P22362 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 AC091271.1-201ENST00000611877 1162 ntBASIC12.08□□□□□ -0.48
CCL1P22362 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms