Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 DUX4L50-201ENST00000455245 715 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 AC091804.1-201ENST00000486888 567 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 MIR497HG-202ENST00000572453 3838 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 KRT18P8-201ENST00000581937 1246 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CR392039.2-201ENST00000623182 509 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 MARK2P9-201ENST00000430958 1727 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AL157791.1-201ENST00000553667 1699 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 TUBBP5-203ENST00000508529 1334 ntBASIC12.63□□□□□ -0.39
HLA-DOBP13765 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DOBP13765 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DOBP13765 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms