Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.55□□□□□ -0.56
DEFA4P12838 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 AL136309.1-201ENST00000403917 691 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 ARSEP1-201ENST00000420443 635 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.55□□□□□ -0.56
DEFA4P12838 AL355994.2-201ENST00000447882 704 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 KRT90P-201ENST00000549264 1064 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.55□□□□□ -0.56
DEFA4P12838 AC005586.2-201ENST00000563946 837 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 MIR4683-201ENST00000579659 81 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 AC008825.2-201ENST00000603374 718 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 ZACNP1-201ENST00000612259 710 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 AL136301.1-201ENST00000615830 422 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 NCLP1-201ENST00000445357 1963 ntBASIC11.55□□□□□ -0.56
DEFA4P12838 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
DEFA4P12838 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
DEFA4P12838 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
DEFA4P12838 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.55□□□□□ -0.56
DEFA4P12838 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 AL590440.2-201ENST00000641973 1595 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
DEFA4P12838 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CNN2P8-201ENST00000421872 913 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 NME2P1-201ENST00000426182 414 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 AC234783.1-201ENST00000441761 496 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.54□□□□□ -0.56
DEFA4P12838 AC023310.1-201ENST00000554836 735 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 AC027237.1-201ENST00000560942 655 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 IGHV3-72-202ENST00000621503 303 ntBASIC11.54□□□□□ -0.56
DEFA4P12838 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms