Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3P10147 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3P10147 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3P10147 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 OR52M2P-201ENST00000414298 959 ntBASIC12.76□□□□□ -0.37
CCL3P10147 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.76□□□□□ -0.37
CCL3P10147 RPL17P11-201ENST00000417593 544 ntBASIC12.76□□□□□ -0.37
CCL3P10147 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CCL3P10147 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 AC092638.2-201ENST00000441105 947 ntBASIC12.76□□□□□ -0.37
CCL3P10147 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL3P10147 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 RN7SKP155-201ENST00000516031 288 ntBASIC12.76□□□□□ -0.37
CCL3P10147 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 AP003398.1-201ENST00000531124 318 ntBASIC12.76□□□□□ -0.37
CCL3P10147 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.76□□□□□ -0.37
CCL3P10147 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL3P10147 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 AL139424.3-202ENST00000641619 917 ntBASIC12.76□□□□□ -0.37
CCL3P10147 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.76□□□□□ -0.37
CCL3P10147 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL3P10147 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CCL3P10147 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
CCL3P10147 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 AL365181.3-201ENST00000605886 3222 ntBASIC12.76□□□□□ -0.37
CCL3P10147 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.76□□□□□ -0.37
CCL3P10147 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 AC093462.1-201ENST00000621167 1683 ntBASIC12.76□□□□□ -0.37
CCL3P10147 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3P10147 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3P10147 AC092053.3-201ENST00000641308 4975 ntBASIC12.76□□□□□ -0.37
CCL3P10147 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CCL3P10147 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.75□□□□□ -0.37
CCL3P10147 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 FMO6P-201ENST00000236166 1620 ntBASIC12.75□□□□□ -0.37
CCL3P10147 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CCL3P10147 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CCL3P10147 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.75□□□□□ -0.37
CCL3P10147 EEF1DP2-201ENST00000433698 843 ntBASIC12.75□□□□□ -0.37
CCL3P10147 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCL3P10147 AC004837.1-201ENST00000446267 564 ntBASIC12.75□□□□□ -0.37
CCL3P10147 STK24P1-201ENST00000455035 1291 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms