Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 AC074019.1-201ENST00000428788 1096 ntBASIC8.36□□□□□ -1.07
APOBP04114 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC8.36□□□□□ -1.07
APOBP04114 MIR4526-201ENST00000583168 87 ntBASIC8.36□□□□□ -1.07
APOBP04114 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 CACYBPP3-201ENST00000406011 625 ntBASIC8.35□□□□□ -1.07
APOBP04114 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 AC010677.1-201ENST00000441690 412 ntBASIC8.35□□□□□ -1.07
APOBP04114 AQP7-207ENST00000447660 998 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 AC114781.1-201ENST00000450559 1028 ntBASIC8.35□□□□□ -1.07
APOBP04114 AC067942.2-201ENST00000506227 1268 ntBASIC8.35□□□□□ -1.07
APOBP04114 FP325317.1-201ENST00000539936 1042 ntBASIC8.35□□□□□ -1.07
APOBP04114 AL353708.1-201ENST00000567904 1257 ntBASIC8.35□□□□□ -1.07
APOBP04114 AL589743.3-201ENST00000604121 517 ntBASIC8.35□□□□□ -1.07
APOBP04114 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 SRSF9P1-201ENST00000399149 530 ntBASIC8.35□□□□□ -1.07
APOBP04114 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC8.35□□□□□ -1.07
APOBP04114 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 CARS-216ENST00000639317 135 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
APOBP04114 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC8.35□□□□□ -1.07
APOBP04114 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC8.35□□□□□ -1.07
APOBP04114 CXXC1P1-202ENST00000489409 1212 ntBASIC8.35□□□□□ -1.07
APOBP04114 RPL30-213ENST00000523172 274 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC8.35□□□□□ -1.07
APOBP04114 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC8.35□□□□□ -1.07
APOBP04114 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 AC106774.4-201ENST00000600799 409 ntBASIC8.35□□□□□ -1.07
APOBP04114 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 MECP2-226ENST00000640414 897 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC8.35□□□□□ -1.07
APOBP04114 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
APOBP04114 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.35□□□□□ -1.07
APOBP04114 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC8.34□□□□□ -1.07
APOBP04114 PIGCP1-201ENST00000527583 895 ntBASIC8.34□□□□□ -1.07
APOBP04114 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 AC099795.2-201ENST00000639582 440 ntBASIC8.34□□□□□ -1.07
APOBP04114 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 AL513497.1-201ENST00000624273 2083 ntBASIC8.34□□□□□ -1.07
APOBP04114 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC8.34□□□□□ -1.07
APOBP04114 KRT8P24-201ENST00000560290 1559 ntBASIC8.34□□□□□ -1.07
APOBP04114 AC023824.1-201ENST00000562945 2975 ntBASIC8.34□□□□□ -1.07
APOBP04114 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
APOBP04114 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
APOBP04114 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms