Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 U3.49-201ENST00000391065 214 ntBASIC6.02□□□□□ -1.45
USH2AO75445 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC6.02□□□□□ -1.45
USH2AO75445 PGAM1P2-201ENST00000436071 725 ntBASIC6.02□□□□□ -1.45
USH2AO75445 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC6.02□□□□□ -1.45
USH2AO75445 CXXC1P1-202ENST00000489409 1212 ntBASIC6.02□□□□□ -1.45
USH2AO75445 RPLP0P2-204ENST00000490750 961 ntBASIC6.02□□□□□ -1.45
USH2AO75445 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC6.02□□□□□ -1.45
USH2AO75445 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 PEBP1P1-201ENST00000554856 510 ntBASIC6.02□□□□□ -1.45
USH2AO75445 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 AC099343.2-201ENST00000605082 686 ntBASIC6.02□□□□□ -1.45
USH2AO75445 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC6.02□□□□□ -1.45
USH2AO75445 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 S100A1-203ENST00000368698 784 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 MTND6P7-201ENST00000433237 524 ntBASIC6.02□□□□□ -1.45
USH2AO75445 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC6.02□□□□□ -1.45
USH2AO75445 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
USH2AO75445 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC6.02□□□□□ -1.45
USH2AO75445 AC092471.1-202ENST00000637160 999 ntBASIC6.02□□□□□ -1.45
USH2AO75445 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 MROH4P-201ENST00000431302 1578 ntBASIC6.02□□□□□ -1.45
USH2AO75445 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USH2AO75445 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 IGLCOR22-1-201ENST00000523725 316 ntBASIC6.02□□□□□ -1.45
USH2AO75445 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC6.02□□□□□ -1.45
USH2AO75445 MDC1-209ENST00000613547 830 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 AC009118.3-201ENST00000622896 873 ntBASIC6.02□□□□□ -1.45
USH2AO75445 SNORA50D-202ENST00000627561 132 ntBASIC6.02□□□□□ -1.45
USH2AO75445 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USH2AO75445 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 AC138035.3-201ENST00000622706 2791 ntBASIC6.02□□□□□ -1.45
USH2AO75445 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USH2AO75445 PFN1P3-201ENST00000443612 402 ntBASIC6.02□□□□□ -1.45
USH2AO75445 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC6.02□□□□□ -1.45
USH2AO75445 PFN1P4-201ENST00000450970 402 ntBASIC6.02□□□□□ -1.45
USH2AO75445 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC6.02□□□□□ -1.45
USH2AO75445 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
USH2AO75445 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms