Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AL589743.3-201ENST00000604121 517 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AC099795.2-201ENST00000639582 440 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AL354702.1-201ENST00000442006 1960 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 MGST3-204ENST00000367888 778 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 TFAM-201ENST00000373895 973 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AL356583.3-201ENST00000412354 417 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 RPL35P1-201ENST00000450819 370 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AC079601.2-201ENST00000547729 775 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 GOLGA2P10-201ENST00000550961 817 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AC090825.2-201ENST00000557959 739 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 MIR1587-201ENST00000583319 53 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AL121992.3-201ENST00000606186 346 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 AC011239.2-201ENST00000624820 1489 ntBASIC15.91■□□□□ 0.14
TMEM88BA6NKF7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 SRSF9P1-201ENST00000399149 530 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 AC007690.1-201ENST00000451924 468 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 TULP3P1-202ENST00000453253 1291 ntBASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 CAP2-207ENST00000493172 861 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM88BA6NKF7 PRDX2P3-201ENST00000515779 586 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms