Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 TSSK5P-201ENST00000423978 907 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AP006288.1-201ENST00000446065 395 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 FAM86GP-201ENST00000448322 971 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AC124283.3-201ENST00000570869 594 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AC004623.1-201ENST00000624592 2127 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AC026271.4-201ENST00000578214 1833 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 AC022144.1-201ENST00000602255 1580 ntBASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
KCNIP3Q9Y2W7 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC099521.2-201ENST00000619354 2036 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC092117.1-201ENST00000621230 3250 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 MIR943-201ENST00000401286 94 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 INE1-201ENST00000456273 945 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AL359711.2-201ENST00000563105 872 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC104794.3-201ENST00000566840 1248 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC008738.7-201ENST00000609744 511 ntBASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
KCNIP3Q9Y2W7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms