Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 SNORA50C-201ENST00000408535 133 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 HMGA1P1-201ENST00000415560 1062 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 CNN2P2-201ENST00000443536 909 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 CNN2P3-201ENST00000450201 906 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 SPDYE18-201ENST00000510091 1050 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 KRT18P58-201ENST00000527480 1120 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 KRT126P-201ENST00000549467 1181 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AL136317.3-201ENST00000618497 906 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AC138466.3-201ENST00000619983 221 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 SNORA50.1-201ENST00000628590 135 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 BX324167.2-201ENST00000623717 3316 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 AL590824.1-201ENST00000403828 1349 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 FAM95B1-212ENST00000592873 4692 ntBASIC12.61□□□□□ -0.39
SSR3Q9UNL2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSR3Q9UNL2 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 SOCS2P1-201ENST00000417727 557 ntBASIC12.6□□□□□ -0.39
SSR3Q9UNL2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSR3Q9UNL2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms