Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AC004967.1-201ENST00000453589 447 ntBASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 GCOM2-201ENST00000509133 1104 ntBASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 NCLP1-201ENST00000445357 1963 ntBASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.13□□□□□ -0.63
RPH3ALQ9UNE2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC139712.1-201ENST00000378256 1875 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC020910.5-201ENST00000623668 1865 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AGAP12P-201ENST00000585227 2359 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 SPDYE19P-201ENST00000338590 713 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 SOCS2P1-201ENST00000417727 557 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AP006288.1-201ENST00000446065 395 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 DNAJB3-202ENST00000449667 1266 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 DOC2GP-202ENST00000514950 1163 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 AC093028.1-201ENST00000622998 982 ntBASIC11.12□□□□□ -0.63
RPH3ALQ9UNE2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms