Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HACD3Q9P035 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HACD3Q9P035 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 MIR1247-201ENST00000408206 136 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AC093752.3-201ENST00000567343 901 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 KRT18P8-201ENST00000581937 1246 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 MIR3615-201ENST00000581999 87 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.33□□□□□ -0.12
HACD3Q9P035 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HACD3Q9P035 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HACD3Q9P035 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HACD3Q9P035 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HACD3Q9P035 AL157791.1-201ENST00000553667 1699 ntBASIC14.33□□□□□ -0.12
HACD3Q9P035 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HACD3Q9P035 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.33□□□□□ -0.12
HACD3Q9P035 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 LINC01815-202ENST00000641468 1409 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.32□□□□□ -0.12
HACD3Q9P035 GPAA1P2-201ENST00000417923 928 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 AK2P2-201ENST00000439142 405 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 BX284668.4-201ENST00000453917 508 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 GOLGA2P8-201ENST00000505201 779 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.32□□□□□ -0.12
HACD3Q9P035 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HACD3Q9P035 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.32□□□□□ -0.12
HACD3Q9P035 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 AL022334.2-201ENST00000610000 484 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.32□□□□□ -0.12
HACD3Q9P035 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HACD3Q9P035 AL157996.1-201ENST00000624684 2299 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.32□□□□□ -0.12
HACD3Q9P035 TUBBP5-203ENST00000508529 1334 ntBASIC14.32□□□□□ -0.12
HACD3Q9P035 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms