Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TUBB4AP1-201ENST00000450755 1325 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 BAK1P1-201ENST00000317045 636 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CHCHD2P2-201ENST00000503744 321 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 MIR5196-201ENST00000578146 115 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 AL133467.4-201ENST00000602953 725 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 GOLGA8IP-202ENST00000611635 2100 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CICP20-201ENST00000443330 2801 ntBASIC17■□□□□ 0.31
RPAP1Q9BWH6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 AC006372.4-201ENST00000624122 1543 ntBASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 BX679664.3-201ENST00000414070 555 ntBASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 AK2P2-201ENST00000439142 405 ntBASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 AC113935.1-201ENST00000471722 555 ntBASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 LINC00634-202ENST00000505157 222 ntBASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RPAP1Q9BWH6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 LINC02486-201ENST00000604157 3000 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC006987.1-201ENST00000413610 527 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC068867.1-201ENST00000559855 150 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 HERC2P11-201ENST00000562845 725 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC100756.2-201ENST00000569537 736 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC005357.2-202ENST00000590507 1060 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC007250.1-201ENST00000608934 338 ntBASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.98■□□□□ 0.31
RPAP1Q9BWH6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms