Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 E2F3P2-201ENST00000447755 1422 ntBASIC12.15□□□□□ -0.46
NICN1Q9BSH3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 FTH1P14-201ENST00000482930 551 ntBASIC12.15□□□□□ -0.46
NICN1Q9BSH3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC006538.3-201ENST00000612495 578 ntBASIC12.15□□□□□ -0.46
NICN1Q9BSH3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 CCT8L1P-201ENST00000465400 1674 ntBASIC12.15□□□□□ -0.46
NICN1Q9BSH3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NICN1Q9BSH3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 AC108024.1-201ENST00000626286 1721 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SALL4P6-201ENST00000429385 1691 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 BCRP1-201ENST00000444246 691 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 RN7SL837P-201ENST00000463010 287 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NICN1Q9BSH3 AC132192.2-201ENST00000596206 1147 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 GPALPP1-207ENST00000611650 899 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 CR392039.2-201ENST00000623182 509 ntBASIC12.14□□□□□ -0.47
NICN1Q9BSH3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms