Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 POU5F1P2-201ENST00000521750 823 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 RN7SL219P-201ENST00000582872 296 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AC020914.3-201ENST00000594712 304 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 AL122018.1-201ENST00000446607 2310 ntBASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDLIM5Q96HC4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 NRADDP-202ENST00000641269 1585 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AC004241.5-201ENST00000623870 2448 ntBASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDLIM5Q96HC4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms