Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-CQ95604 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 RN7SL4P-201ENST00000584058 295 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 AC005332.2-201ENST00000590010 930 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC245369.8-201ENST00000636589 306 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC018442.1-201ENST00000421439 2061 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-CQ95604 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC067930.6-201ENST00000623257 4947 ntBASIC14.32□□□□□ -0.12
HLA-CQ95604 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC139143.1-201ENST00000441772 1207 ntBASIC14.32□□□□□ -0.12
HLA-CQ95604 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-CQ95604 SNORA47-201ENST00000458862 138 ntBASIC14.32□□□□□ -0.12
HLA-CQ95604 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC104115.1-201ENST00000484005 623 ntBASIC14.32□□□□□ -0.12
HLA-CQ95604 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-CQ95604 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 MIR4309-201ENST00000582498 83 ntBASIC14.32□□□□□ -0.12
HLA-CQ95604 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-CQ95604 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HLA-CQ95604 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-CQ95604 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HLA-CQ95604 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-CQ95604 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-CQ95604 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-CQ95604 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-CQ95604 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HLA-CQ95604 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-CQ95604 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-CQ95604 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-CQ95604 FAM86FP-201ENST00000338711 969 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms