Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 RN7SL788P-201ENST00000460504 316 ntBASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 LINC00634-202ENST00000505157 222 ntBASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 AL122018.1-201ENST00000446607 2310 ntBASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP6V0A1Q93050 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 RNA5SP406-201ENST00000516106 112 ntBASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 LINC00244-201ENST00000625073 613 ntBASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP6V0A1Q93050 AC061965.1-201ENST00000560524 1465 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 TBC1D27-202ENST00000424239 1573 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 AL009178.2-201ENST00000597278 2719 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 RN7SL767P-201ENST00000493013 295 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 AC132825.4-202ENST00000578792 434 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 AL157996.1-201ENST00000624684 2299 ntBASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP6V0A1Q93050 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATP6V0A1Q93050 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP6V0A1Q93050 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms