Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC008825.2-201ENST00000603374 718 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AL358472.3-201ENST00000608147 415 ntBASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.95□□□□□ -0.5
RTN4IP1Q8WWV3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL035414.1-201ENST00000451327 857 ntBASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ACA64.2-201ENST00000459014 129 ntBASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AC008687.7-202ENST00000637404 953 ntBASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 REXO1L1P-201ENST00000379010 6598 ntBASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 AL445250.1-201ENST00000641671 2259 ntBASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms