Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 SRL-202ENST00000537996 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 RPL21P135-201ENST00000442539 791 ntBASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 AC007690.1-201ENST00000451924 468 ntBASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 POM121L14P-201ENST00000406100 1558 ntBASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARHGEF40Q8TER5 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AC126177.1-201ENST00000547829 2218 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 ZDHHC8P1-202ENST00000418264 1403 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 HNRNPA1P30-202ENST00000440699 997 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 HNRNPA1P7-201ENST00000521273 963 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AP001120.3-201ENST00000585729 489 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 AC124319.4-201ENST00000622931 2161 ntBASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.94■□□□□ 0.78
ARHGEF40Q8TER5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 GAPDHP65-201ENST00000425487 1006 ntBASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 APRT-202ENST00000426324 664 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 BCRP5-201ENST00000514371 253 ntBASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AL606834.1-201ENST00000553836 1169 ntBASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 MIR7704-201ENST00000610524 59 ntBASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARHGEF40Q8TER5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms