Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 ALG3P1-201ENST00000508806 1114 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 DUX4L27-201ENST00000554796 1261 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AC005586.2-201ENST00000563946 837 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 MIR8072-201ENST00000614241 80 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 AL845472.1-202ENST00000624675 4080 ntBASIC12.25□□□□□ -0.45
BEST4Q8NFU0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BEST4Q8NFU0 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 ACKR1-201ENST00000368121 1240 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 ARSEP1-201ENST00000420443 635 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CLUHP2-201ENST00000426660 1303 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AL512638.1-201ENST00000457493 794 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 MESTP3-201ENST00000503460 968 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AC055876.2-201ENST00000531834 546 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AC099568.2-201ENST00000609194 695 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AC005252.2-201ENST00000624630 1141 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.24□□□□□ -0.45
BEST4Q8NFU0 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BEST4Q8NFU0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
BEST4Q8NFU0 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms