Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 POM121L14P-201ENST00000406100 1558 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AP000437.1-201ENST00000624057 2085 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AC102953.2-201ENST00000609755 3026 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 CNN2P8-201ENST00000421872 913 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC136604.1-202ENST00000425471 771 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 ZACNP1-201ENST00000612259 710 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC025048.6-201ENST00000634326 1161 ntBASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.49□□□□□ -0.41
DNAAF1Q8NEP3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 DLX4-206ENST00000611342 1662 ntBASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
DNAAF1Q8NEP3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms