Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.78□□□□□ -0.36
ATG4DQ86TL0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 PPT1-213ENST00000641319 2388 ntBASIC12.77□□□□□ -0.36
ATG4DQ86TL0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATG4DQ86TL0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AL662890.1-201ENST00000396818 632 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 RN7SL574P-201ENST00000581512 297 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AC079336.7-201ENST00000623428 1078 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AC020917.4-201ENST00000623994 1999 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 FRMPD2B-201ENST00000431305 1347 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AL157791.1-201ENST00000553667 1699 ntBASIC12.77□□□□□ -0.37
ATG4DQ86TL0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATG4DQ86TL0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CR383656.2-201ENST00000548656 2254 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 MIR769-201ENST00000390225 118 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms