Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AL358472.3-201ENST00000608147 415 ntBASIC9.47□□□□□ -0.89
SCXQ7RTU7 AP001505.2-201ENST00000616815 443 ntBASIC9.47□□□□□ -0.89
SCXQ7RTU7 CU633904.3-201ENST00000624042 1029 ntBASIC9.47□□□□□ -0.89
SCXQ7RTU7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CICP16-201ENST00000502609 2813 ntBASIC9.47□□□□□ -0.89
SCXQ7RTU7 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC9.47□□□□□ -0.89
SCXQ7RTU7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
SCXQ7RTU7 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 AC083964.2-201ENST00000623988 2396 ntBASIC9.46□□□□□ -0.89
SCXQ7RTU7 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 AC009093.2-202ENST00000620513 2079 ntBASIC9.46□□□□□ -0.89
SCXQ7RTU7 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SCXQ7RTU7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC9.46□□□□□ -0.89
SCXQ7RTU7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 Z97180.1-201ENST00000445173 988 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC245884.6-201ENST00000515672 1067 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC105129.2-201ENST00000559536 390 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC138696.2-201ENST00000607376 223 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AC091812.3-201ENST00000621362 345 ntBASIC9.46□□□□□ -0.9
SCXQ7RTU7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SCXQ7RTU7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC9.46□□□□□ -0.9
SCXQ7RTU7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms