Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 RNVU1-8-201ENST00000364272 125 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AL357563.1-201ENST00000404728 395 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 MTATP6P25-201ENST00000574491 261 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC040904.1-201ENST00000590850 223 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC138466.4-201ENST00000623965 852 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC026748.1-201ENST00000624349 3251 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ODCP-201ENST00000459650 1639 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AL139008.1-201ENST00000437894 228 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 AL445669.2-201ENST00000454425 421 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 MTND2P38-201ENST00000522536 667 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 SNORD3B-1-201ENST00000577988 758 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.98□□□□□ -0.01
VARS2Q5ST30 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 TBC1D27-202ENST00000424239 1573 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 AL139158.3-201ENST00000641212 1562 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms