Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 AC004890.2-204ENST00000481968 304 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 AC010327.4-202ENST00000591484 748 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 AC145423.3-201ENST00000615987 467 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 AL161773.1-201ENST00000624845 863 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 TMBIM7P-202ENST00000641474 1516 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 BX324167.2-201ENST00000623717 3316 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 AL139158.3-201ENST00000641212 1562 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
SSBP1Q04837 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SSBP1Q04837 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 MIR943-201ENST00000401286 94 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 AC010141.1-201ENST00000411585 623 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP1Q04837 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP1Q04837 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 AC022217.1-201ENST00000521069 738 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP1Q04837 AC004449.1-201ENST00000564240 433 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP1Q04837 CTBP2P3-201ENST00000585629 1255 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 AL031432.4-201ENST00000641729 2190 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 AC134407.3-201ENST00000624035 2139 ntBASIC11.93□□□□□ -0.5
SSBP1Q04837 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP1Q04837 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP1Q04837 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
SSBP1Q04837 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSBP1Q04837 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP1Q04837 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP1Q04837 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP1Q04837 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP1Q04837 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms