Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092896.1-201ENST00000465850 380 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 IGHEP2-201ENST00000519308 1256 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 AC004801.1-201ENST00000549557 360 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 AC027139.1-201ENST00000565286 951 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 DGAT2L7P-201ENST00000602462 744 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 AC113385.2-201ENST00000614465 762 ntBASIC15.86■□□□□ 0.13
CCNA1P78396 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCNA1P78396 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCNA1P78396 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 AC041040.1-201ENST00000425197 460 ntBASIC15.85■□□□□ 0.13
CCNA1P78396 AC104212.2-201ENST00000478813 628 ntBASIC15.85■□□□□ 0.13
CCNA1P78396 AC023906.1-201ENST00000486386 453 ntBASIC15.85■□□□□ 0.13
CCNA1P78396 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.85■□□□□ 0.13
CCNA1P78396 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.85■□□□□ 0.13
CCNA1P78396 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.85■□□□□ 0.13
CCNA1P78396 AC026336.4-201ENST00000624565 1050 ntBASIC15.85■□□□□ 0.13
CCNA1P78396 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCNA1P78396 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNA1P78396 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCNA1P78396 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCNA1P78396 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.84■□□□□ 0.13
CCNA1P78396 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCNA1P78396 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 OR10N1P-201ENST00000392758 869 ntBASIC15.84■□□□□ 0.13
CCNA1P78396 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCNA1P78396 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.84■□□□□ 0.13
CCNA1P78396 AC015818.1-201ENST00000451011 244 ntBASIC15.84■□□□□ 0.13
CCNA1P78396 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.84■□□□□ 0.13
CCNA1P78396 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.84■□□□□ 0.13
CCNA1P78396 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNA1P78396 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms