Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 MIR718-201ENST00000390190 70 ntBASIC10.52□□□□□ -0.73
HIST1H2BCP62807 YBX2P1-201ENST00000394192 760 ntBASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AC015922.1-201ENST00000421102 1152 ntBASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 C2-211ENST00000469372 1906 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AL590483.3-201ENST00000623669 3580 ntBASIC10.52□□□□□ -0.73
HIST1H2BCP62807 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BCP62807 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 POM121L1P-202ENST00000605258 1835 ntBASIC10.51□□□□□ -0.73
HIST1H2BCP62807 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 DCK-204ENST00000504952 2614 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 TUBB2BP1-201ENST00000404155 871 ntBASIC10.51□□□□□ -0.73
HIST1H2BCP62807 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BCP62807 AP002383.4-201ENST00000442518 975 ntBASIC10.51□□□□□ -0.73
HIST1H2BCP62807 TSSC2-201ENST00000450217 709 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms