Protein–RNA interactions for Protein: P62318

SNRPD3, Small nuclear ribonucleoprotein Sm D3, humanhuman

Known RBP Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3P62318 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SNRPD3P62318 AC013355.1-201ENST00000562625 723 ntBASIC10.72□□□□□ -0.69
SNRPD3P62318 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.72□□□□□ -0.69
SNRPD3P62318 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.72□□□□□ -0.69
SNRPD3P62318 AL132994.2-201ENST00000603120 687 ntBASIC10.72□□□□□ -0.69
SNRPD3P62318 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.72□□□□□ -0.69
SNRPD3P62318 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
SNRPD3P62318 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.72□□□□□ -0.69
SNRPD3P62318 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SNRPD3P62318 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
SNRPD3P62318 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
SNRPD3P62318 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC10.72□□□□□ -0.69
SNRPD3P62318 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SNRPD3P62318 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.71□□□□□ -0.69
SNRPD3P62318 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.71□□□□□ -0.69
SNRPD3P62318 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 VDAC1P1-201ENST00000439229 848 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.71□□□□□ -0.69
SNRPD3P62318 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.71□□□□□ -0.69
SNRPD3P62318 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 GOLGA2P8-201ENST00000505201 779 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 RN7SL219P-201ENST00000582872 296 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.71□□□□□ -0.69
SNRPD3P62318 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SNRPD3P62318 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 MIR6752-201ENST00000618442 71 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 CR392039.2-201ENST00000623182 509 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SNRPD3P62318 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 AC068587.8-201ENST00000641239 219 ntBASIC10.71□□□□□ -0.69
SNRPD3P62318 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SNRPD3P62318 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SNRPD3P62318 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SNRPD3P62318 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
SNRPD3P62318 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SNRPD3P62318 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms