Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.48■□□□□ 0.07
USP8P40818 FAM58BP-201ENST00000439056 645 ntBASIC15.48■□□□□ 0.07
USP8P40818 ST13P19-201ENST00000442505 1124 ntBASIC15.48■□□□□ 0.07
USP8P40818 RNMTL1P1-201ENST00000454103 560 ntBASIC15.48■□□□□ 0.07
USP8P40818 RPL13AP20-201ENST00000459725 609 ntBASIC15.48■□□□□ 0.07
USP8P40818 RPSAP36-202ENST00000494591 1261 ntBASIC15.48■□□□□ 0.07
USP8P40818 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.48■□□□□ 0.07
USP8P40818 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.48■□□□□ 0.07
USP8P40818 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.48■□□□□ 0.07
USP8P40818 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.48■□□□□ 0.07
USP8P40818 AC124068.2-201ENST00000569473 1109 ntBASIC15.48■□□□□ 0.07
USP8P40818 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.48■□□□□ 0.07
USP8P40818 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
USP8P40818 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.48■□□□□ 0.07
USP8P40818 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
USP8P40818 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
USP8P40818 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.48■□□□□ 0.07
USP8P40818 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
USP8P40818 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
USP8P40818 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC15.48■□□□□ 0.07
USP8P40818 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
USP8P40818 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC15.47■□□□□ 0.07
USP8P40818 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
USP8P40818 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
USP8P40818 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 BTBD6P1-201ENST00000412176 1267 ntBASIC15.47■□□□□ 0.07
USP8P40818 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 HSPB1P2-201ENST00000448722 546 ntBASIC15.47■□□□□ 0.07
USP8P40818 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.47■□□□□ 0.07
USP8P40818 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.47■□□□□ 0.07
USP8P40818 AL160314.3-201ENST00000556041 767 ntBASIC15.47■□□□□ 0.07
USP8P40818 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
USP8P40818 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.47■□□□□ 0.07
USP8P40818 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
USP8P40818 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.47■□□□□ 0.07
USP8P40818 MIR497HG-202ENST00000572453 3838 ntBASIC15.47■□□□□ 0.07
USP8P40818 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
USP8P40818 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
USP8P40818 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
USP8P40818 CYP4F23P-201ENST00000593402 1579 ntBASIC15.46■□□□□ 0.07
USP8P40818 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
USP8P40818 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.46■□□□□ 0.07
USP8P40818 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
USP8P40818 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.46■□□□□ 0.07
USP8P40818 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
USP8P40818 AC006122.1-201ENST00000493323 440 ntBASIC15.46■□□□□ 0.07
USP8P40818 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.46■□□□□ 0.07
USP8P40818 RNA5SP412-201ENST00000516234 123 ntBASIC15.46■□□□□ 0.07
USP8P40818 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms