Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.59□□□□□ -0.55
CEACAM3P40198 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CEACAM3P40198 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
CEACAM3P40198 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CEACAM3P40198 MEX3B-202ENST00000558133 4333 ntBASIC11.59□□□□□ -0.55
CEACAM3P40198 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.59□□□□□ -0.55
CEACAM3P40198 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CEACAM3P40198 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 RPL13AP3-202ENST00000494676 1473 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.58□□□□□ -0.56
CEACAM3P40198 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 RNA5SP359-201ENST00000364838 113 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.58□□□□□ -0.56
CEACAM3P40198 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 PFN2-206ENST00000461930 606 ntTSL 4 BASIC11.58□□□□□ -0.56
CEACAM3P40198 RN7SL11P-201ENST00000471305 293 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 RN7SL277P-201ENST00000481521 288 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AC093752.3-201ENST00000567343 901 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.58□□□□□ -0.56
CEACAM3P40198 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AL022334.2-201ENST00000610000 484 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
CEACAM3P40198 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.58□□□□□ -0.56
CEACAM3P40198 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 KRT8P24-201ENST00000560290 1559 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 SHMT1P1-201ENST00000419974 1312 ntBASIC11.58□□□□□ -0.56
CEACAM3P40198 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CEACAM3P40198 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CEACAM3P40198 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CEACAM3P40198 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.57□□□□□ -0.56
CEACAM3P40198 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CEACAM3P40198 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CEACAM3P40198 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms