Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC17.12■□□□□ 0.33
PDE6BP35913 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDE6BP35913 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.12■□□□□ 0.33
PDE6BP35913 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDE6BP35913 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDE6BP35913 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
PDE6BP35913 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6BP35913 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PDE6BP35913 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDE6BP35913 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 MPV17-209ENST00000405983 859 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6BP35913 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC17.11■□□□□ 0.33
PDE6BP35913 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.11■□□□□ 0.33
PDE6BP35913 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.11■□□□□ 0.33
PDE6BP35913 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 GUCY2EP-203ENST00000531117 1918 ntBASIC17.11■□□□□ 0.33
PDE6BP35913 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6BP35913 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.11■□□□□ 0.33
PDE6BP35913 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PDE6BP35913 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDE6BP35913 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
PDE6BP35913 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDE6BP35913 AC092384.3-202ENST00000564646 2873 ntBASIC17.11■□□□□ 0.33
PDE6BP35913 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PDE6BP35913 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6BP35913 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDE6BP35913 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDE6BP35913 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6BP35913 MIR611-201ENST00000384869 67 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 MED15P3-201ENST00000413613 326 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 AC098657.1-201ENST00000416270 1135 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 CDK4P1-201ENST00000454213 828 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 RN7SL684P-201ENST00000465665 294 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.1■□□□□ 0.33
PDE6BP35913 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 AC010202.1-201ENST00000551181 405 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE6BP35913 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE6BP35913 AC005746.3-201ENST00000614751 393 ntBASIC17.1■□□□□ 0.33
PDE6BP35913 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE6BP35913 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE6BP35913 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDE6BP35913 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms