Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 AC004554.1-201ENST00000422830 1468 ntBASIC16.14■□□□□ 0.17
KRT2P35908 AC025183.3-201ENST00000623526 1482 ntBASIC16.14■□□□□ 0.17
KRT2P35908 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
KRT2P35908 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT2P35908 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 AC131212.3-201ENST00000624087 4219 ntBASIC16.14■□□□□ 0.17
KRT2P35908 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT2P35908 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
KRT2P35908 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT2P35908 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 AC135782.3-201ENST00000562782 2105 ntBASIC16.13■□□□□ 0.17
KRT2P35908 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 MIR645-201ENST00000385283 94 ntBASIC16.13■□□□□ 0.17
KRT2P35908 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT2P35908 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT2P35908 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT2P35908 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
KRT2P35908 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 AL133467.4-201ENST00000602953 725 ntBASIC16.13■□□□□ 0.17
KRT2P35908 AP001505.2-201ENST00000616815 443 ntBASIC16.13■□□□□ 0.17
KRT2P35908 AC015967.2-201ENST00000624092 234 ntBASIC16.13■□□□□ 0.17
KRT2P35908 AC006435.4-201ENST00000625037 234 ntBASIC16.13■□□□□ 0.17
KRT2P35908 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 AL356737.1-201ENST00000634391 234 ntBASIC16.13■□□□□ 0.17
KRT2P35908 AL139424.3-202ENST00000641619 917 ntBASIC16.13■□□□□ 0.17
KRT2P35908 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 KRT18P9-201ENST00000604826 1300 ntBASIC16.13■□□□□ 0.17
KRT2P35908 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT2P35908 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRT2P35908 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT2P35908 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT2P35908 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
KRT2P35908 SNORA50C-201ENST00000408535 133 ntBASIC16.12■□□□□ 0.17
KRT2P35908 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT2P35908 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT2P35908 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.12■□□□□ 0.17
KRT2P35908 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.12■□□□□ 0.17
KRT2P35908 AC008723.1-201ENST00000506922 207 ntBASIC16.12■□□□□ 0.17
KRT2P35908 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms