Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 SALL4P6-201ENST00000429385 1691 ntBASIC15.48■□□□□ 0.07
KRT9P35527 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 HMGA1P1-201ENST00000415560 1062 ntBASIC15.48■□□□□ 0.07
KRT9P35527 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.48■□□□□ 0.07
KRT9P35527 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
KRT9P35527 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.48■□□□□ 0.07
KRT9P35527 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.48■□□□□ 0.07
KRT9P35527 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.48■□□□□ 0.07
KRT9P35527 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.48■□□□□ 0.07
KRT9P35527 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KRT9P35527 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT9P35527 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT9P35527 AC012441.2-201ENST00000444843 739 ntBASIC15.47■□□□□ 0.07
KRT9P35527 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT9P35527 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT9P35527 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.47■□□□□ 0.07
KRT9P35527 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 MIR4259-201ENST00000584466 101 ntBASIC15.47■□□□□ 0.07
KRT9P35527 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.47■□□□□ 0.07
KRT9P35527 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.47■□□□□ 0.07
KRT9P35527 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
KRT9P35527 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
KRT9P35527 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
KRT9P35527 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms