Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 MIR718-201ENST00000390190 70 ntBASIC10.52□□□□□ -0.73
HIST1H2BBP33778 YBX2P1-201ENST00000394192 760 ntBASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AC015922.1-201ENST00000421102 1152 ntBASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 C2-211ENST00000469372 1906 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AL590483.3-201ENST00000623669 3580 ntBASIC10.52□□□□□ -0.73
HIST1H2BBP33778 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
HIST1H2BBP33778 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 POM121L1P-202ENST00000605258 1835 ntBASIC10.51□□□□□ -0.73
HIST1H2BBP33778 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 DCK-204ENST00000504952 2614 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 TUBB2BP1-201ENST00000404155 871 ntBASIC10.51□□□□□ -0.73
HIST1H2BBP33778 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.51□□□□□ -0.73
HIST1H2BBP33778 AP002383.4-201ENST00000442518 975 ntBASIC10.51□□□□□ -0.73
HIST1H2BBP33778 TSSC2-201ENST00000450217 709 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms